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McDonnell Genome Institute
Washington University
Transcript
lnc-PRPF38A-1:1
Chromosome
chr1
Gene Name
lnc-PRPF38A-1
Start
52253620
CPC Label
coding
End
52254176
Cancer
HCC
Strand
+
Peptide
APPGTDPEQLEK
Modified Peptide
n[230]APPGTDPEQLEK
Peptide Length
12
ORF Length
157
Open Reading Frame (ORF)
MTTPNKAPPGTDPEQLEKTGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLYIYADYKSDESYTPSKISAKVGNNFHNLQEIRQLELVEPSGWIHIPLTDNHRKPTWTLMIQIAVLASHQNGKDTHPYETN
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
3
CPC Coding Probability
0.980823
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.6919
PhyloCSF Frame 3
0
CNTI Score
-0.367693831
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