top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-PRDM8-6:1
Chromosome
chr4
Gene Name
lnc-PRDM8-6
Start
80046494
CPC Label
coding
End
80082269
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
LTPSIVCHSPGGLPR
Modified Peptide
n[145]LTPSIVCHSPGGLPR
Peptide Length
15
ORF Length
39
Open Reading Frame (ORF)
LTPSIVCHSPGGLPRWQPSAACQSLRERRKGFDMEGKGM
Conservation Score
0.056
PhyloCSF Frame 1
0
No. of Spectra
150
CPC Coding Probability
0.977416
PhyloCSF Frame 2
-3.418
CNTI Index
coding
Max Probability
1
PhyloCSF Frame 3
-4.634
CNTI Score
0.654913462
bottom of page