top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-PLCD3-1:15
Chromosome
chr17
Gene Name
lnc-PLCD3-1
Start
45146729
CPC Label
noncoding
End
45148225
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
DQGSSLGR
Modified Peptide
n[145]DQGSSLGR
Peptide Length
8
ORF Length
94
Open Reading Frame (ORF)
LVSESRPRPRGKCKLVIRDQGSSLGRDRKAGAGGGRGSGGGSGGRPRPHASASVEENGLLGPIWSFHFRPRSFPEPGQRRSGTAMRLFVGKSSE
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
3
CPC Coding Probability
0.0440769
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9987
PhyloCSF Frame 3
-2.249
CNTI Score
-0.325136628
bottom of page