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McDonnell Genome Institute

Washington University

Transcript

lnc-PGPEP1L-60:2

Chromosome

chr15

Gene Name

lnc-PGPEP1L-60

Start

96045340

CPC Label

noncoding

End

96064357

Cancer

HCC

Strand

-

Peptide

GEYFSHR

Modified Peptide

n[230]GEYFSHR

Peptide Length

7

ORF Length

72

Open Reading Frame (ORF)

MMFSSLPITEHVCIHCGWASLRKLPFRPSRGALHCPKILLSYSHVRAGKGEYFSHRIASSIPTGSEIVPVGC

Conservation Score

0.899

PhyloCSF Frame 1

0.284

No. of Spectra

1

CPC Coding Probability

0.0497173

PhyloCSF Frame 2 

-4.222

CNTI Index

noncoding

Max Probability

0.9994

PhyloCSF Frame 3

-5.426

CNTI Score

-0.354956533

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