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McDonnell Genome Institute

Washington University

Transcript

lnc-PEX11G-3:1

Chromosome

chr19

Gene Name

lnc-PEX11G-3

Start

7532729

CPC Label

noncoding

End

7536484

Cancer

BRCA-Basal-like

Strand

-

Peptide

GGYGNIR

Modified Peptide

n[145]GGYGNIR

Peptide Length

7

ORF Length

139

Open Reading Frame (ORF)

MRGHWKVTEILRITILLLGKPGGGWAHSWGAYESGPGEGVRAPWKILRDAGILLGFFWEAEDVSDIARILMEIRGPGDRNPGDSESLLGKFLGGRSSSTSGHSWLPVWKHLPRRGGYGNIRKSRVNRNRRTDRGKAEAR

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

7

CPC Coding Probability

0.272581

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9435

PhyloCSF Frame 3

0

CNTI Score

-0.282790788

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