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McDonnell Genome Institute

Washington University

Transcript

lnc-PEPD-3:1

Chromosome

chr19

Gene Name

lnc-PEPD-3

Start

33371949

CPC Label

noncoding

End

33373552

Cancer

OSCC

Strand

-

Peptide

TSLDNIARPHLSY

Modified Peptide

n[145]TSLDNIARPHLSY

Peptide Length

13

ORF Length

87

Open Reading Frame (ORF)

LRWFCEPPATVLVSPRPLEAPAASLTEFLRTERPAGGRALSPQKEWRLTRWLPPIISAPREAEAGEWLEPRRWRTSLDNIARPHLSY

Conservation Score

0.062

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.0160115

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.0756

PhyloCSF Frame 3

0

CNTI Score

-0.320361934

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