top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-PDCD1LG2-1:1
Chromosome
chr9
Gene Name
lnc-PDCD1LG2-1
Start
5584489
CPC Label
noncoding
End
5588994
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
LFSLGSGK
Modified Peptide
n[145]LFSLGSGK
Peptide Length
8
ORF Length
38
Open Reading Frame (ORF)
LRLFSLGSGKGSHGQWTLVICRNIDPYHKVEGQGIKGR
Conservation Score
0.164
PhyloCSF Frame 1
-5.006
No. of Spectra
1
CPC Coding Probability
0.0419148
PhyloCSF Frame 2
-5.861
CNTI Index
noncoding
Max Probability
0.0509
PhyloCSF Frame 3
-5.705
CNTI Score
-0.500177276
bottom of page