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McDonnell Genome Institute
Washington University
Transcript
lnc-PCSK7-1:3
Chromosome
chr11
Gene Name
lnc-PCSK7-1
Start
117195612
CPC Label
noncoding
End
117201914
Cancer
OSCC
Strand
-
Peptide
LPQGHMVNGTVPTSLENRPASVTPEITHSHLAR
Modified Peptide
n[145]LPQGHM[147]VNGTVPTSLENRPASVTPEITHSHLAR
Peptide Length
33
ORF Length
89
Open Reading Frame (ORF)
LRMDAGAHSPGSLSGLSLLLRPWGPARVGHRAPTQMRKLRPRVRLPQGHMVNGTVPTSLENRPASVTPEITHSHLARTWLQGSWGEIRG
Conservation Score
0.386
PhyloCSF Frame 1
-4.927
No. of Spectra
6
CPC Coding Probability
0.145294
PhyloCSF Frame 2
-3.07
CNTI Index
coding
Max Probability
0.8015
PhyloCSF Frame 3
-3.743
CNTI Score
0.67312907
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