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McDonnell Genome Institute

Washington University

Transcript

lnc-PCDH9-11:1

Chromosome

chr13

Gene Name

lnc-PCDH9-11

Start

68301604

CPC Label

noncoding

End

68303302

Cancer

HCC

Strand

-

Peptide

KDLCGGH

Modified Peptide

n[230]KDLCGGH

Peptide Length

7

ORF Length

42

Open Reading Frame (ORF)

MNARTEKVDRRVVQPKTAAALRQNSQRPGVHLTVKKDLCGGH

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

43

CPC Coding Probability

0.288213

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9974

PhyloCSF Frame 3

0

CNTI Score

-0.319504334

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