top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-OXSM-3:1
Chromosome
chr3
Gene Name
lnc-OXSM-3
Start
25749487
CPC Label
noncoding
End
25749896
Cancer
OV
Strand
+
Peptide
TYCAEIAHNVSSK
Modified Peptide
n[145]TYCAEIAHNVSSK
Peptide Length
13
ORF Length
111
Open Reading Frame (ORF)
LTDMSKIKCNWRKPRGIDDRVHRRFKSQILMPNISYGSNKKTKHMLPSGFQKFLVHNVKELEVLLMCNKTYCAEIAHNVSSKNCKAIMERATQLAIRVTNPNARLHSEENE
Conservation Score
1
PhyloCSF Frame 1
-4.717
No. of Spectra
39
CPC Coding Probability
0.402174
PhyloCSF Frame 2
-4.339
CNTI Index
coding
Max Probability
1
PhyloCSF Frame 3
0.01
CNTI Score
0.669196764
bottom of page