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McDonnell Genome Institute
Washington University
Transcript
lnc-OR2S2-1:1
Chromosome
chr9
Gene Name
lnc-OR2S2-1
Start
35971343
CPC Label
coding
End
35972318
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
EDVFVHQTARK
Modified Peptide
n[145]EDVFVHQTARK
Peptide Length
11
ORF Length
157
Open Reading Frame (ORF)
LGTVKWFSVRNGYGFINRNDTKEDVFVHQTARKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSTYAADRNHYRRYPRRRVLHAITSKITRIVRVGKRTRDRRVLPQAKPNNAGPTAGEGSHLTTCGDPMGVDHSIPTLLCRVK
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.707401
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.5204
PhyloCSF Frame 3
0
CNTI Score
-0.267154927
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