top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-NXPH1-2:10
Chromosome
chr7
Gene Name
lnc-NXPH1-2
Start
8261437
CPC Label
noncoding
End
8355282
Cancer
PRAD
Strand
+
Peptide
APAPTPEGRYLGAPAPR
Modified Peptide
Peptide Length
17
ORF Length
249
Open Reading Frame (ORF)
LPTRELGVLGPEPPGRRGARWVGGVGWHGCRCSQRWGRSAERFPTAPPGLTHALTARASSRPSQAGGRRGGEGADAVPAPGSGTRGGDSPITRRPRRAEKAAPTRRPRPSRLPGVSCCFLQPARRAPAPTPEGRYLGAPAPRSLPAAVGASLRITHPTSASAEGEGKGRGERRNRPFLRRPPPAGIATGGARAHRSAAQRPGGAGALAARLPTAAWAPPLPPFPASTLQQTPAGATPPRVTGGRCSTWP
Conservation Score
1
PhyloCSF Frame 1
1.771
No. of Spectra
1
CPC Coding Probability
0.160861
PhyloCSF Frame 2
4.345
CNTI Index
coding
Max Probability
0.1117
PhyloCSF Frame 3
2.056
CNTI Score
0.751756541
bottom of page