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McDonnell Genome Institute
Washington University
Transcript
lnc-MGMT-1:1
Chromosome
chr10
Gene Name
lnc-MGMT-1
Start
129768843
CPC Label
noncoding
End
129769435
Cancer
BRCA-Luminal A
Strand
+
Peptide
QACTLQAGCLR
Modified Peptide
n[145]QACTLQAGCLR
Peptide Length
11
ORF Length
163
Open Reading Frame (ORF)
LQPHLDRQACTLQAGCLRCLGPMNDGSLPVRSSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARRFPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKYKTIFQIKRNVET
Conservation Score
0.996
PhyloCSF Frame 1
-0.391
No. of Spectra
26
CPC Coding Probability
0.182058
PhyloCSF Frame 2
0.872
CNTI Index
noncoding
Max Probability
0.9986
PhyloCSF Frame 3
-2.572
CNTI Score
-0.322897576
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