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McDonnell Genome Institute
Washington University
Transcript
lnc-MAP1LC3B2-28:13
Chromosome
chr12
Gene Name
lnc-MAP1LC3B2-28
Start
116533453
CPC Label
coding
End
116546660
Cancer
HCC
Strand
+
Peptide
EGGSQWK
Modified Peptide
n[230]EGGSQWK
Peptide Length
7
ORF Length
109
Open Reading Frame (ORF)
MLLETTTGTTSLLHALSCPVPPAPPLLQEFTLVSSFQNVREGGSQWKRAGGWVTCGYGIPLLYFNHPAILVSLCRFSFLVHFYLNKGHPRFFKLANQQFFWNLCLLTLN
Conservation Score
0.219
PhyloCSF Frame 1
0
No. of Spectra
11
CPC Coding Probability
0.680411
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9974
PhyloCSF Frame 3
0
CNTI Score
-0.317889202
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