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McDonnell Genome Institute
Washington University
Transcript
lnc-LIPI-17:1
Chromosome
chr21
Gene Name
lnc-LIPI-17
Start
13443372
CPC Label
noncoding
End
13489176
Cancer
BRCA-Luminal B
Strand
-
Peptide
TISAFAR
Modified Peptide
n[145]TISAFAR
Peptide Length
7
ORF Length
110
Open Reading Frame (ORF)
LSPRLKNWPSLRPKWPASQSIKQISLPSELKDRGHNFFNTRRDFQADFVKYCVEEEEKVAEMHKIKSTTQVNQMSVDVVEMATLGKKQLRTISAFARESFTKTHRGTCTI
Conservation Score
1
PhyloCSF Frame 1
0.659
No. of Spectra
3
CPC Coding Probability
0.208084
PhyloCSF Frame 2
0.395
CNTI Index
noncoding
Max Probability
0.8494
PhyloCSF Frame 3
4.083
CNTI Score
-0.316268523
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