top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-LINC00672-4:1
Chromosome
chr17
Gene Name
lnc-LINC00672-4
Start
39029905
CPC Label
coding
End
39053205
Cancer
CRC
Strand
+
Peptide
EVEPSATQQQASGQPPK
Modified Peptide
Peptide Length
17
ORF Length
298
Open Reading Frame (ORF)
LPNVTIRPPDMQLTIATEPTAEVGSSPIHQEATAQVSGPGSDVEPSATQHGGAPLRPESSEDAGPLAGQQETSVQSPEPVNNENPSPTQQEAAAEHPQTPEEAESSPAQQEAQPQTPDPPKEVEPSPVQQEFPAEPPEPPKEVEPSATQQQASGQPPKSTEEVSPPPQQEIPAQPSEPPEKVKPSPVLQQTPTQLLEPPKEVESSPVQQAGPAQSSEAPVVIEPSRTQQMAPSSPPELPQEVEPSLNSAGGSSSDSRAPYGGRTFSNPAGGHSSDSRAPYGGRTFKPAAGPSSASRVT
Conservation Score
0.307
PhyloCSF Frame 1
1.487
No. of Spectra
1
CPC Coding Probability
0.999998
PhyloCSF Frame 2
-3.989
CNTI Index
coding
Max Probability
0.9254
PhyloCSF Frame 3
-2.99
CNTI Score
0.742939833
bottom of page