top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-KHDRBS1-3:1
Chromosome
chr1
Gene Name
lnc-KHDRBS1-3
Start
31937883
CPC Label
coding
End
31940654
Cancer
EOGC
Strand
+
Peptide
SCVLSFGLENVVTSELGGWFGPRPDGK
Modified Peptide
n[145]SCVLSFGLENVVTSELGGWFGPRPDGK
Peptide Length
27
ORF Length
141
Open Reading Frame (ORF)
LNFKLSDLMSPLTTQIIVEILRWKGFCLLHLEASQKFFARSCVLSFGLENVVTSELGGWFGPRPDGKVRHWRLAWEGDVSPWELRVGEGLFFLSTPGKSCLPRTGAYIGRNEDAPVGASPPPRHHIHAHPALRGEAVICRH
Conservation Score
1
PhyloCSF Frame 1
-4.165
No. of Spectra
3
CPC Coding Probability
0.508106
PhyloCSF Frame 2
-1.407
CNTI Index
noncoding
Max Probability
0.1959
PhyloCSF Frame 3
-4.919
CNTI Score
-0.254905924
bottom of page