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McDonnell Genome Institute

Washington University

Transcript

lnc-IRX3-80:55

Chromosome

chr16

Gene Name

lnc-IRX3-80

Start

54851512

CPC Label

noncoding

End

54924928

Cancer

CCRC

Strand

-

Peptide

IHISCILEVFTCIK

Modified Peptide

IHISCILEVFTCIK

Peptide Length

14

ORF Length

38

Open Reading Frame (ORF)

LLSATFIKIHISCILEVFTCIKILIFLLYKIDVGGSHS

Conservation Score

0.983

PhyloCSF Frame 1

-4.754

No. of Spectra

3

CPC Coding Probability

0.0475034

PhyloCSF Frame 2 

-4.179

CNTI Index

noncoding

Max Probability

0.9978

PhyloCSF Frame 3

-4.431

CNTI Score

-0.367094165

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