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McDonnell Genome Institute

Washington University

Transcript

lnc-INO80C-1:14

Chromosome

chr18

Gene Name

lnc-INO80C-1

Start

35443866

CPC Label

noncoding

End

35467081

Cancer

OSCC

Strand

-

Peptide

TFILDFPAFRDVK

Modified Peptide

n[145]TFILDFPAFRDVK

Peptide Length

13

ORF Length

60

Open Reading Frame (ORF)

LLPPARCGSRYPLHGWAPRKGHARTQGEGQLSVSQKEPSLETKSARTFILDFPAFRDVKK

Conservation Score

0.433

PhyloCSF Frame 1

-4.785

No. of Spectra

27

CPC Coding Probability

0.0411148

PhyloCSF Frame 2 

-5.447

CNTI Index

noncoding

Max Probability

0.734

PhyloCSF Frame 3

-4.968

CNTI Score

-0.343847437

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