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McDonnell Genome Institute

Washington University

Transcript

lnc-IFT46-1:16

Chromosome

chr11

Gene Name

lnc-IFT46-1

Start

118511910

CPC Label

noncoding

End

118531141

Cancer

OV

Strand

-

Peptide

GQDAGAGGVGEAR

Modified Peptide

n[145]GQDAGAGGVGEAR

Peptide Length

13

ORF Length

187

Open Reading Frame (ORF)

LVPSPRRVPPSALLSGRGQDAGAGGVGEARRLYWFRAQSRPLARGRPGPRRSAAVTGAAQLPHHVGQHAVAQRGVGVEQHQLAPREGAAQPCRPLEVPAGVVVSALQPRQESALHKALAGGAAPAAAQLHRAFQILQGACGTDETGGAGVSGGQGGLARAPAHLRPRGSPWFLRLPGVAIYNPPRTC

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

0.0389562

PhyloCSF Frame 2 

10.432

CNTI Index

coding

Max Probability

0.8266

PhyloCSF Frame 3

0

CNTI Score

0.755295309

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