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McDonnell Genome Institute
Washington University
Transcript
lnc-HNRNPA3-5:1
Chromosome
chr2
Gene Name
lnc-HNRNPA3-5
Start
177197984
CPC Label
noncoding
End
177198547
Cancer
BRCA-Basal-like
Strand
+
Peptide
ASLEAAVADAEQRGELAIK
Modified Peptide
n[145]ASLEAAVADAEQRGELAIK
Peptide Length
19
ORF Length
183
Open Reading Frame (ORF)
LRHTTTEISEMNRNISWLQAEIEGLKGQKASLEAAVADAEQRGELAIKDANAKLSELEAALQRAKQDMAWQLHEYQELMNIKLALDMEIATYRKLLEGKDSRLESGMQNMSIHTKTTSSYAGGLSSAYGGLTSPSLSYGLGSSFGSGVGSSSFSHSSSTRAVVVKKIQTRNGKLVSESSDVLR
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
3
CPC Coding Probability
0.164648
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9999
PhyloCSF Frame 3
0
CNTI Score
0.791573506
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