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McDonnell Genome Institute
Washington University
Transcript
lnc-HMHB1-6:2
Chromosome
chr5
Gene Name
lnc-HMHB1-6
Start
143226167
CPC Label
noncoding
End
143228996
Cancer
PRAD
Strand
+
Peptide
LSFVDMALPETAVATMAPR
Modified Peptide
LSFVDM[147]ALPETAVATMAPR
Peptide Length
19
ORF Length
46
Open Reading Frame (ORF)
LSFVDMALPETAVATMAPRVCPSTECFVSNHVPQVGSQRCRNQTAS
Conservation Score
0.109
PhyloCSF Frame 1
-3.873
No. of Spectra
4
CPC Coding Probability
0.0483366
PhyloCSF Frame 2
-4.743
CNTI Index
noncoding
Max Probability
0.8424
PhyloCSF Frame 3
-5.684
CNTI Score
-0.336222797
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