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McDonnell Genome Institute
Washington University
Transcript
lnc-HMGB2-3:10
Chromosome
chr4
Gene Name
lnc-HMGB2-3
Start
173159293
CPC Label
noncoding
End
173169484
Cancer
OV
Strand
-
Peptide
SPPDPALRPLRPQSR
Modified Peptide
n[145]SPPDPALRPLRPQSR
Peptide Length
15
ORF Length
192
Open Reading Frame (ORF)
LREGRLDQGAWSTGPAVAASASRLLQACTRHRPQPGPTPRPRAVSAAVPAPQSGTPGGRSPPDPALRPLRPQSRRGERPPEPLPRQRGCRRRSPGRGRAEEGAARGRAGGGQGGRSARGSAPPRPALRQHHLRSCGAHAVPRPRRPCSLHTRANKTSCRSLPPEGAGRVTHPHPAQRAWVVRPRGQGRPEDH
Conservation Score
1
PhyloCSF Frame 1
6.339
No. of Spectra
4
CPC Coding Probability
0.0980223
PhyloCSF Frame 2
4.06
CNTI Index
coding
Max Probability
0.7493
PhyloCSF Frame 3
1.782
CNTI Score
0.716982635
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