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McDonnell Genome Institute

Washington University

Transcript

lnc-HES5-3:4

Chromosome

chr1

Gene Name

lnc-HES5-3

Start

2539779

CPC Label

noncoding

End

2541966

Cancer

EOGC

Strand

-

Peptide

LGTSLLSIPLAPNLR

Modified Peptide

n[145]LGTSLLSIPLAPNLR

Peptide Length

15

ORF Length

77

Open Reading Frame (ORF)

LGTSLLSIPLAPNLRALPAQASWDAALPTPPQLSDARVSKPLPPPGCGFALAGGSHTARAGGEGSVPGPPRGISAGV

Conservation Score

1

PhyloCSF Frame 1

-1.858

No. of Spectra

2

CPC Coding Probability

0.132699

PhyloCSF Frame 2 

1.352

CNTI Index

noncoding

Max Probability

0.9976

PhyloCSF Frame 3

0.785

CNTI Score

-0.321599614

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