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McDonnell Genome Institute
Washington University
Transcript
lnc-GPCPD1-8:14
Chromosome
chr20
Gene Name
lnc-GPCPD1-8
Start
5472305
CPC Label
noncoding
End
5504596
Cancer
OSCC
Strand
-
Peptide
VPGWTPPCLTGPASFGAGWDGK
Modified Peptide
n[145]VPGWTPPCLTGPASFGAGWDGK
Peptide Length
22
ORF Length
108
Open Reading Frame (ORF)
LSCLGHSGGSWQSIRGQGGDPWSAGSGHPGTKGAPAPGLGEGQSGGDLGSAGEPPRMGSHHLPGKRGLITGAGARQALPPGSGRVPGWTPPCLTGPASFGAGWDGKGK
Conservation Score
0.096
PhyloCSF Frame 1
-3.554
No. of Spectra
1
CPC Coding Probability
0.15877
PhyloCSF Frame 2
-4.508
CNTI Index
noncoding
Max Probability
0.8585
PhyloCSF Frame 3
-3.22
CNTI Score
-0.305027009
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