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McDonnell Genome Institute
Washington University
Transcript
lnc-FOXD3-5:1
Chromosome
chr1
Gene Name
lnc-FOXD3-5
Start
63262112
CPC Label
noncoding
End
63262707
Cancer
OV
Strand
+
Peptide
ADHTPFTGLSYVK
Modified Peptide
n[145]ADHTPFTGLSYVK
Peptide Length
13
ORF Length
136
Open Reading Frame (ORF)
LLPFGNSAAVSVTSSRNVSQQAMLKFAAATGATLISGSFANQIQVAFWEPCLLMVTDPRADHTPFTGLSYVKLTTIALCHTYSPLRYVIITISCNDKGAHSVGPMWWILAWEVLHMHGTIFCEHPWEVMPDDYFCR
Conservation Score
1
PhyloCSF Frame 1
-2.564
No. of Spectra
2
CPC Coding Probability
0.0680733
PhyloCSF Frame 2
-4.358
CNTI Index
noncoding
Max Probability
0.9726
PhyloCSF Frame 3
-3.767
CNTI Score
-0.36852062
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