top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-FCN1-1:4
Chromosome
chr9
Gene Name
lnc-FCN1-1
Start
134819176
CPC Label
coding
End
134872636
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
LAGQHVTYR
Modified Peptide
n[145]LAGQHVTYR
Peptide Length
9
ORF Length
101
Open Reading Frame (ORF)
LAGQHVTYRGALSTFWTRRTLQREEGRTSASRVSAPAPPCSMSCPAWSRPSPLSHPHPPQESMLVFARLEWEEGRGLAGAHPSWRHRVVLPAPGQPTTHPG
Conservation Score
1
PhyloCSF Frame 1
10.87
No. of Spectra
3
CPC Coding Probability
0.953809
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9996
PhyloCSF Frame 3
0
CNTI Score
-0.277155151
bottom of page