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McDonnell Genome Institute
Washington University
Transcript
lnc-FAM19A5-15:1
Chromosome
chr22
Gene Name
lnc-FAM19A5-15
Start
48052645
CPC Label
noncoding
End
48058275
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
LFSLAWECLPR
Modified Peptide
n[145]LFSLAWECLPR
Peptide Length
11
ORF Length
155
Open Reading Frame (ORF)
LAQMVLCLAPSGRTVVSGRTPHLAFPPLHLSQVGLLPAARLHDGTWLLPGLSSFVSSKASRKIFPHLNSDQVTPCSAALAGPLPSGSQGPCVCSRLFSLAWECLPRAPDNTLTLSQFQKSRHTQSFPDPWLLLTELSPLLKAQHKHQLPHKHFGI
Conservation Score
0.366
PhyloCSF Frame 1
0
No. of Spectra
5
CPC Coding Probability
0.483826
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.7663
PhyloCSF Frame 3
0
CNTI Score
-0.311224058
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