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McDonnell Genome Institute

Washington University

Transcript

lnc-ERMARD-4:1

Chromosome

chr6

Gene Name

lnc-ERMARD-4

Start

170025529

CPC Label

noncoding

End

170033581

Cancer

BRCA-Luminal A

Strand

+

Peptide

VDIIQTK

Modified Peptide

n[145]VDIIQTK

Peptide Length

7

ORF Length

119

Open Reading Frame (ORF)

MSPLLGFASINTFWTRPGLRQKVDIIQTKNKCPGEERRKEMLLLLPVPPPSRVLCRAGCRQGLVTLAPSSSPSLPLHLDPCASWYPGPQPFPLRKRVRANSWPQPIKNRVFPSLRPQMF

Conservation Score

0.678

PhyloCSF Frame 1

0

No. of Spectra

33

CPC Coding Probability

0.450917

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9999

PhyloCSF Frame 3

0

CNTI Score

-0.37437259

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