top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-ERCC5-3:1
Chromosome
chr13
Gene Name
lnc-ERCC5-3
Start
102800231
CPC Label
noncoding
End
102801832
Cancer
EOGC
Strand
+
Peptide
GGLPVSFDR
Modified Peptide
n[145]GGLPVSFDR
Peptide Length
9
ORF Length
124
Open Reading Frame (ORF)
LRAGDSGCPRHARRRGLGWPRAGSAAALLPLCPRRLRAHWFCAAGLGLRDCLLRPGGLGARPSGELVRGRWWKRSRPPQGRGLEAGARRGGLPVSFDRLAPRLWGPAGPGDTIIWKTRLAGCRR
Conservation Score
0.939
PhyloCSF Frame 1
-2.906
No. of Spectra
1
CPC Coding Probability
0.00792843
PhyloCSF Frame 2
-2.824
CNTI Index
noncoding
Max Probability
0.9984
PhyloCSF Frame 3
-1.729
CNTI Score
-0.307191423
bottom of page