top of page

McDonnell Genome Institute

Washington University

Transcript

lnc-EMC1-1:1

Chromosome

chr1

Gene Name

lnc-EMC1-1

Start

19254790

CPC Label

coding

End

19263003

Cancer

BRCA-Luminal B

Strand

-

Peptide

LLTGYIWQHLK

Modified Peptide

n[145]LLTGYIWQHLK

Peptide Length

11

ORF Length

33

Open Reading Frame (ORF)

LLTGYIWQHLKTFLVVIAGRSGRQEAAIPWVRR

Conservation Score

0.041

PhyloCSF Frame 1

-2.96

No. of Spectra

1

CPC Coding Probability

0.735074

PhyloCSF Frame 2 

-4.091

CNTI Index

noncoding

Max Probability

0.9281

PhyloCSF Frame 3

-3.245

CNTI Score

-0.294732538

Follow Us:

  • Twitter Clean
bottom of page