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McDonnell Genome Institute
Washington University
Transcript
lnc-COL25A1-2:1
Chromosome
chr4
Gene Name
lnc-COL25A1-2
Start
108788744
CPC Label
noncoding
End
108789779
Cancer
BRCA-Basal-like
Strand
-
Peptide
LATADRIR
Modified Peptide
n[145]LATADRIR
Peptide Length
8
ORF Length
181
Open Reading Frame (ORF)
LATADRIRLQTGAPASGHLHREDQKLTDAACTKRGCARCGQWHQPHSGSGLPEASLLWGSSGYGWLGHAEQKDEMVPRLVKLFDFSGRGVSQIYAGYTCFFAISEVGGLFFWGSPTPPMNLPCTRKQCRTSVAGEYGAWLVERAASLWPPMRAPSAGARRRPSGNTAMGTTSPSLPLQPKR
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.156259
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.1025
PhyloCSF Frame 3
0
CNTI Score
-0.302215644
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