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McDonnell Genome Institute
Washington University
Transcript
lnc-CLEC20A-8:2
Chromosome
chr1
Gene Name
lnc-CLEC20A-8
Start
178538624
CPC Label
coding
End
178542105
Cancer
OV
Strand
-
Peptide
LGALHIEGGR
Modified Peptide
n[145]LGALHIEGGR
Peptide Length
10
ORF Length
278
Open Reading Frame (ORF)
LFPSTQLLPQYIMGICCYCSVCFGGPASSIHSIWEDSPVTLGRNPSAPLEMEGMEGTRCPSCPPPLQRSQPSYPAQPSGALKARVQEQKRTYFWPWQLGQETICESSILCPVAAVPATVSSPQPGHSLASPASPAASRLDTCPFSPCGSPAFRLISSAHISPCPLPARVSQVSSVASTKTSHCSGCAELAADVCSTVSALGILLLLGVPEGGIPGLSKHCCVTHARSLRLPVKLGALHIEGGRLSFQQSLVAFSESDYAAARPTTEVTTTTPVPMTIL
Conservation Score
0.376
PhyloCSF Frame 1
-2.693
No. of Spectra
1
CPC Coding Probability
0.995231
PhyloCSF Frame 2
-3.352
CNTI Index
noncoding
Max Probability
0.9688
PhyloCSF Frame 3
-1.76
CNTI Score
-0.294305414
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