top of page

McDonnell Genome Institute

Washington University

Transcript

lnc-CALN1-4:1

Chromosome

chr7

Gene Name

lnc-CALN1-4

Start

70618193

CPC Label

noncoding

End

70620820

Cancer

OV

Strand

-

Peptide

KSPIQTTQRPEGAK

Modified Peptide

n[145]KSPIQTTQRPEGAK

Peptide Length

14

ORF Length

57

Open Reading Frame (ORF)

MKSPIQTTQRPEGAKGQGSGQFKEKQSGLWFYNPSPGLGHQHRRAKGPTNPFPSTSQ

Conservation Score

1

PhyloCSF Frame 1

-3.581

No. of Spectra

5

CPC Coding Probability

0.066002

PhyloCSF Frame 2 

-5.69

CNTI Index

noncoding

Max Probability

0.9509

PhyloCSF Frame 3

-3.175

CNTI Score

-0.386711598

Follow Us:

  • Twitter Clean
bottom of page