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McDonnell Genome Institute
Washington University
Transcript
lnc-C4BPA-1:1
Chromosome
chr1
Gene Name
lnc-C4BPA-1
Start
207179295
CPC Label
noncoding
End
207184062
Cancer
BRCA-Basal-like
Strand
+
Peptide
LSLEIKQLEK
Modified Peptide
n[145]LSLEIKQLEK
Peptide Length
10
ORF Length
163
Open Reading Frame (ORF)
LAGFATIYCKSFHWQLAPPQCKALCLKPEIVNGRLSVDKDQYVESENVTIECDSGYGVVGLKSITCSEKRTWYPEVPRCEWEAPEGCEQVLTGRKLMQCLPSPEDVKVALEVYKLSLEIKQLEKERDKLMNTHQKFSEKEEMKDLFFPSNQHTESSLIHPTLP
Conservation Score
1
PhyloCSF Frame 1
-3.389
No. of Spectra
1
CPC Coding Probability
0.143829
PhyloCSF Frame 2
5.694
CNTI Index
noncoding
Max Probability
0.8335
PhyloCSF Frame 3
-0.904
CNTI Score
-0.312640564
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