top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-C16orf58-6:2
Chromosome
chr16
Gene Name
lnc-C16orf58-6
Start
31567766
CPC Label
coding
End
31569524
Cancer
BRCA-Luminal B
Strand
-
Peptide
EDLFIHQTAIK
Modified Peptide
n[145]EDLFIHQTAIK
Peptide Length
11
ORF Length
154
Open Reading Frame (ORF)
MSESRGGGGMSEAGEATIITTTLQQAPAVAAAAAPQDPATKSRVGSGAPQAAAPAPAALVAGNPGGDGAPAATGTAAAASLATAADSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDLFIHQTAIKKNNPQKYLRSVGDGETVEFDVV
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.939294
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9955
PhyloCSF Frame 3
0
CNTI Score
0.748657572
bottom of page