top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-ATRIP-24:2
Chromosome
chr3
Gene Name
lnc-ATRIP-24
Start
48662995
CPC Label
coding
End
48673942
Cancer
OV
Strand
+
Peptide
DGVDPGSNR
Modified Peptide
n[145]DGVDPGSNR
Peptide Length
9
ORF Length
306
Open Reading Frame (ORF)
LLVWIAPAEQGPEMTLPRREQRPNSSLPCWSPAVSRARGPFTGGCTPSQAASPECSGMPRGARRCPMAAGPASSGPRPSSVTTACLNPLKGLTQKLSPPPTLGAFQLSLRNSWHAPVSPGQWVDLAQQTSREERRRGVNAEHSNRSVIVSIGTMGGPAPHGGLIAWGRGLRGLPANRERVREVHYTDRPPKAESITSCSAGCRGRGHPEAQEEVRAGTPERSTGCGSRDGVDPGSNRRGTPGQGLWPAPNGPYDITINQSVGASFRPLTAPLPGGGASAGSTSRAPLVATKVRQQVSSCSLSCLRI
Conservation Score
1
PhyloCSF Frame 1
0.009
No. of Spectra
8
CPC Coding Probability
0.950022
PhyloCSF Frame 2
-0.648
CNTI Index
coding
Max Probability
0.9807
PhyloCSF Frame 3
-2.246
CNTI Score
0.680537135
bottom of page