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McDonnell Genome Institute
Washington University
Transcript
lnc-ASTN1-3:1
Chromosome
chr1
Gene Name
lnc-ASTN1-3
Start
176616267
CPC Label
coding
End
176616789
Cancer
HCC
Strand
-
Peptide
YGATTIVR
Modified Peptide
n[230]YGATTIVR
Peptide Length
8
ORF Length
170
Open Reading Frame (ORF)
MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIEELKKYGATTIVRVCEATYDTTLVEKEGIHVLNWPFGDGAPPSNQIVADWLHFVKIKFCEEPGCYIAVNCIVGLGKAPVLVALASVEGGMKHEDAVQFIGQKRSGAFKSKQLLYLEKYHPKMRLRFKDSNSHINNCCIQ
Conservation Score
1
PhyloCSF Frame 1
-4.382
No. of Spectra
2
CPC Coding Probability
0.988821
PhyloCSF Frame 2
-3.879
CNTI Index
coding
Max Probability
0.9604
PhyloCSF Frame 3
-3.352
CNTI Score
0.575243914
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