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McDonnell Genome Institute
Washington University
Transcript
lnc-ARHGEF19-1:1
Chromosome
chr1
Gene Name
lnc-ARHGEF19-1
Start
16216468
CPC Label
coding
End
16228027
Cancer
BRCA-Luminal A
Strand
-
Peptide
KDYELIK
Modified Peptide
n[145]KDYELIK
Peptide Length
7
ORF Length
184
Open Reading Frame (ORF)
MASSALQFHFHFQFVNFYSSPFYMAFFKGRFVGYPGHAVLVAATFRSPSSSSSSWWANSCSTTWKNLLVEIIMVPASKGCWLGGRSGSWQGRGTPRSGRSCSTGRRKDYELIKCQGLFDEYPGAAVWVHHHLCGSLPAGTPVHSAQQPGRDWTGRPQVPVQVPATNGWARLSSRLHLGLLPHIP
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
4
CPC Coding Probability
0.998722
PhyloCSF Frame 2
-0.967
CNTI Index
coding
Max Probability
0.9981
PhyloCSF Frame 3
-4.056
CNTI Score
0.707736242
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