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McDonnell Genome Institute
Washington University
Transcript
lnc-ALKBH3-5:1
Chromosome
chr11
Gene Name
lnc-ALKBH3-5
Start
43733758
CPC Label
noncoding
End
43734564
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
SVVEKAEQRK
Modified Peptide
n[145]SVVEKAEQRK
Peptide Length
10
ORF Length
127
Open Reading Frame (ORF)
LVSRQVSDDLTERAATFGFILDYVSLTHLTFRKEFTEAVEAKKVAQQEAERARSVVEKAEQRKKAAIISAEGDSKAAELITNSLATAGDSLIELCKLEVVEDIAYQLSLSEYHLPASRAVRAPPAAP
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.080846
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.3098
PhyloCSF Frame 3
0
CNTI Score
0.745991669
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