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McDonnell Genome Institute

Washington University

Transcript

LINC00313:30

Chromosome

chr21

Gene Name

LINC00313

Start

43453821

CPC Label

coding

End

43478142

Cancer

CCRC

Strand

-

Peptide

FGSSVDR

Modified Peptide

n[230]FGSSVDR

Peptide Length

7

ORF Length

283

Open Reading Frame (ORF)

LTRQVEQGATFIEFVFRTHSRVLFFWGQAGSTMWDIISKERRGPGELTGRFGSSVDRQVLRTFGKDRTRSRAALWWLRAREEVASLSVDGWMHAPDPGAEAEKGSRGPRDHTWQGGGGRGSHLLGKLHRMIWAEDARVWKKWYLPHARCCPPPAQGQSWGQRGSRVPPVGAWRSRRKCETRCRQGSPPEPAGGGRWLRGTGRPPHGQGGKGFLQSQDLVSITASQQRIGSACCQEAPRSRSSPSAAALQGRGAQTLQGSTARGPGAGSTPGAVGLSVSPAQPL

Conservation Score

0.259

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

0.542788

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9931

PhyloCSF Frame 3

0

CNTI Score

-0.26920645

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