top of page
McDonnell Genome Institute
Washington University
CircRNA
chr1|12275824|12279650|+|VPS13D|ENST00000613099.4
Cancer
Type of Peptide
BRCA-Luminal B
junction_peptide
Highest Probability Peptide Matching Spectra
No. of Spectra
0.9636
2
No. of Amino Acids from 5' Exons
No. of Amino Acids from 3' Exons
6
6
Peptide
FVNPVQITPGGK
Amino Acids from 5' Exons
ITPGGKVGMGQHLKRPSLVMMNIRPPWPHLLTPHLPSQAAATERKHLPFLELSSVKNSFKHIAQRCMRGTRCHLWTSRSWLDEKTIGSMSRILTWDQHMWRSSTFTYSSVDFILQIPNIQEPCSQATYQTKSTLMKIKYLHRIALLSSPPQKKLLTLRLKKRFFPRRSSGEVCKTPIPRALCCWSSIPARFWWSRSSSWRNLKTVCSLVLRAMAGTFLCSRCLVPMLTLRGLMMLKSPLFMVCSWWIPCRHMVLILTFWLHIRTALIFQREAFGIAGPSLLSLDRMWPTLMELHTTDQLLVFHLTKFLPKSKSPLLSWNISLVQSAHRITVLFRFPYRIIILSSIQRRLWSLVFFKNPFPRKKMIVLNLLILKEASENKELTSLHMNKTLRLQWKSIGTYCFFGQWAWQIERNMAEKLQLQVVAPKLMSQWVARLTMVLLAVYSLWIHKITLKTSMLSALGILAMKISSVILATLNLCLSEWKMQPSLKLVSRLLRDLNRSVFSTRWLLYIITTLLSFRSRYPWMNWKKIFEVCKAQPPKSPQYLPRLPSIARWYRSLKLQGRLGNPLSRKMKYMGLTLRLIWTLSSTTLNHQLFLSLGSRGVLSCWWDTWDRYSSRILWREMMNPEVTVCRWKSRTLNCILIAPSWQVEKLLGLKEAGCFAHLPGLAVPTVRRKLISHDMISLNLCIEVK,LQEEKGWVSIRDPVIDPPGHTSHPTSRVKQQQRRENTSLFWSVQRTASSTFNEHKDVEVLAVIYGPPDHGWTSERQLEACPGYRGTNTCGREVQRSPTVRASIDLYFRSQISRSRALRQLTRLKNPHRNICTKELLCSPHHPRNENFHSDRKDFSPGGAAGKFARLRNEFNPEHCVVGAAYPRGSGGVAAPPGGISELYAAWCEQWPVHFCAQGVWYQCSLCEEALCSLPNCSWFAPGGYHADIWCFPFDGFTELELYSNGKPSGQGPVSCLWTECGPLNWSYTERPISYCFTQNSYQRARVPYVGISVCEFRVPIDEFRQYSSGDFPTGEFRYYPQSRDDCGANWFSSKILSQGKRFKSSTFNDFKKLQRTRNLPVYITKHGCSGNPAELTASSDSGHGKREIWQKNCNCKYRWHQSCLNGHVHEWFSWLFTAYGFDTRRKPVCCQHWEFCRLKYHQYWLLICVCQNGRCSPHSFEFHVCEITGVFSQPEDGFFTLPLCVFEGVDVIHGTGRKFSRYAEKRSHQSHHSTSYQDCRVRDGIALNSKEDSGTLYLRGKNIWVPSFVSFGHCKANLEHKHITSCFYPSEAGESVVGGTLGTDIHPEFCGGRIQKPSAGGNQGHTVFFELHPVGRRSCWVRKPDVLPTFRVWQCQQSGGSSFHTTFLIFARS,NSRRKSRDGSASEETQFSDDEYKTPLATPPNTPPPESSSSNGEKTPPFSGVEFSEEQLQAHLMSTKMYERYSLSFMDLQIMVGRVKDNWKHVQDIDVGPTHVVEKFNVHLQLERRLIYTSDPKYPGAVLSGNLPDLKIHINEDKISALKNCFALLTTPEMKTSDTQIKEKIFPQEEQRGSLQDSVMNLTQSIVLLEQHTREVLVESQLLLAEFKVNCMQLGVESNGRYISVLKVFGTNAHFVKRPYDAEVSLTVHGLLLVDTMQTYGADFDLLMASHKNLSFDIPTGSLRDSRAQSPVSGPNVAHLTDGATLNDRSATSVSLDKILTKEQESLIKLEYQFVSSECPSMNLDSTLQVISLQVNNLDIILNPETIVELIGFLQKSFPKEKDDLSPQPLMTDFERSFREQGTYQSTYEQNTEVAVEIHRLNLLLLRTVGMANREKYGRKIATASIGGTKVNVSMGSTFDMNGSLGCLQLMDLTQDNVKNQYVVSIGNSVGYENIISDIGYFESVFVRMEDAALTEALSFTFVERSKQECFLNLKMASLHYNHSAKFLKELTLSMDELEENFRGMLKSAATKVTTVLATKTAEYSEMVSLFETPRKTREPFILEENEIYGFDLASSHLDTVKLILNINIESPVVSIPRKPGSPELLVGHLGQIFIQNFVAGDDESRSDRLQVEIKDIKLYSLNCTQLAGREAVGSEGSRMFCPPSGSGSANSQEEAHFTRHDFFESLHRGQ
Amino Acids from 3' Exons
LFTSTTPPFSLNWRRSLRENLNLFLLAQMTWELLASRLKENLSIQF,FSHPEQHHHSVTGEDPYRERIIDFFSPRPGNFHHEDRKICQSSS,FHILNNTTIQFKLEKIPIERESELTFSLSPDDLGTSSIMKIEGKFVNPVQ
bottom of page