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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Missense | chr11:117840348 | missense_variant | 4 | P/S | Ccc/Tcc | Consequential_in_both_canonical_and_ncORF | Overlapping | 11 | 117839802 | 117840357 |
Splice | chr11:117840312 | missense_variant | 16 | V/L | Gtc/Ctc | Consequential_in_ncORF_only | Not_overlapping | 11 | 117839802 | 117840357 |
Missense | chr11:117179384 | stop_gained | 75 | W/* | tgG/tgA | Consequential_in_both_canonical_and_ncORF | Overlapping | 11 | 117179160 | 117179435 |
Missense | chr11:114247332 | missense_variant | 30 | S/R | agC/agA | Consequential_in_both_canonical_and_ncORF | Overlapping | 11 | 114247243 | 114250385 |
Silent | chr11:114250378 | missense_variant | 59 | R/P | cGg/cCg | Consequential_in_ncORF_only | Overlapping | 11 | 114247243 | 114250385 |
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