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Neoantigens from upstream, downstream and out-of-frame ORFs in breast and ovarian cancer

Use criteria below to search 

Gene
Transcript
Peptide
Modified peptide
Chr
Peptide length
Type
Start
End
Strand
Transcript start
Transcript end
Assigned Modifications
Cancer
PRPF40B
XM_011538136.3
MITSDPMSCSLLR
n[145]M[147]ITSDPM[147]SCSLLR
12
13
3'UTR
49644179
49644448
+
3992
4262
1M(15.9949), 7M(15.9949), 9C(57.0215), N-term(144.1021)
BRCA
PRPF40B
XM_011538137.3
MITSDPMSCSLLR
n[145]M[147]ITSDPMSCSLLR
12
13
3'UTR
49644179
49644448
+
3914
4184
1M(15.9949), 9C(57.0215), N-term(144.1021)
BRCA
PRPF40B
XM_011538137.3
MITSDPMSCSLLR
n[145]M[147]ITSDPMSCSLLR
12
13
3'UTR
49644179
49644448
+
3914
4184
1M(15.9949), 9C(57.0215), N-term(144.1021)
OV
PRPF40B
XM_011538137.3
MITSDPMSCSLLR
n[145]M[147]ITSDPM[147]SCSLLR
12
13
3'UTR
49644179
49644448
+
3914
4184
1M(15.9949), 7M(15.9949), 9C(57.0215), N-term(144.1021)
BRCA
PRPF40B
XM_011538138.3
MITSDPMSCSLLR
n[145]M[147]ITSDPMSCSLLR
12
13
3'UTR
49644179
49644448
+
3884
4154
1M(15.9949), 9C(57.0215), N-term(144.1021)
BRCA
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