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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Missense | chr2:121728349 | missense_variant | 9 | V/I | Gta/Ata | Consequential_in_both_canonical_and_ncORF | Overlapping | 2 | 121727849 | 121730909 |
Missense | chr2:121469813 | missense_variant | 45 | L/I | Ctt/Att | Consequential_in_both_canonical_and_ncORF | Overlapping | 2 | 121462537 | 121469945 |
5'UTR | chr2:120797306 | stop_gained | 34 | R/* | Cga/Tga | Consequential_in_ncORF_only | Not_overlapping | 2 | 120792355 | 120797311 |
Silent | chr2:120990672 | missense_variant | 30 | L/V | Cta/Gta | Consequential_in_ncORF_only | Overlapping | 2 | 120989354 | 120990776 |
3'UTR | chr2:120990705 | missense_variant | 41 | R/W | Cgg/Tgg | Consequential_in_ncORF_only | Not_overlapping | 2 | 120989354 | 120990776 |
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