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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
5'UTR | chr2:135604828 | stop_gained | 80 | R/* | Cga/Tga | Consequential_in_ncORF_only | Not_overlapping | 2 | 135586501 | 135604836 |
Missense | chr2:135021800 | missense_variant | 30 | V/I | Gtc/Atc | Consequential_in_both_canonical_and_ncORF | Overlapping | 2 | 135021768 | 135030368 |
Missense | chr2:135021800 | missense_variant | 23 | V/I | Gtc/Atc | Consequential_in_both_canonical_and_ncORF | Overlapping | 2 | 135021768 | 135023244 |
Missense | chr2:132148144 | missense_variant | 62 | H/N | Cac/Aac | Consequential_in_both_canonical_and_ncORF | Overlapping | 2 | 132148121 | 132154695 |
Splice | chr2:132150976 | missense_variant | 12 | A/V | gCg/gTg | Consequential_in_ncORF_only | Not_overlapping | 2 | 132148121 | 132154695 |
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