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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Silent | chr20:20290361 | missense_variant | 54 | L/F | Ctt/Ttt | Consequential_in_ncORF_only | Overlapping | 20 | 20277361 | 20290387 |
Missense | chr20:20074302 | missense_variant | 81 | H/Q | caC/caA | Consequential_in_both_canonical_and_ncORF | Overlapping | 20 | 20069811 | 20074308 |
Missense | chr20:20070867 | missense_variant | 28 | P/L | cCt/cTt | Consequential_in_both_canonical_and_ncORF | Overlapping | 20 | 20052523 | 20070889 |
Silent | chr20:20052544 | missense_variant | 8 | L/F | Ctc/Ttc | Consequential_in_ncORF_only | Overlapping | 20 | 20052523 | 20070889 |
Splice | chr20:20022456 | stop_lost | 92 | */Q | Taa/Caa | Consequential_in_ncORF_only | Not_overlapping | 20 | 20017769 | 20022458 |
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