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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Missense | chr1:201143851 | stop_gained | 66 | Y/* | taC/taG | Consequential_in_both_canonical_and_ncORF | Overlapping | 1 | 201143848 | 201151779 |
5'Flank | chr1:197916687 | missense_variant | 38 | R/H | cGc/cAc | Consequential_in_ncORF_only | Not_overlapping | 1 | 197916575 | 197916715 |
Intron | chr1:197477576 | missense_variant | 47 | G/S | Ggt/Agt | Consequential_in_ncORF_only | Not_overlapping | 1 | 197442183 | 197477590 |
Missense | chr1:197442192 | missense_variant | 4 | P/S | Cct/Tct | Consequential_in_both_canonical_and_ncORF | Overlapping | 1 | 197442183 | 197477590 |
Silent | chr1:197176628 | missense_variant | 20 | A/V | gCg/gTg | Consequential_in_ncORF_only | Overlapping | 1 | 197175976 | 197178432 |
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