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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
3'UTR | chr1:39004160 | stop_lost | 39 | */S | tGa/tCa | Consequential_in_ncORF_only | Not_overlapping | 1 | 39004045 | 39004161 |
Silent | chr1:38918988 | missense_variant | 43 | S/L | tCa/tTa | Consequential_in_ncORF_only | Overlapping | 1 | 38915551 | 38919115 |
Missense | chr1:38915677 | missense_variant | 61 | S/R | agC/agA | Consequential_in_both_canonical_and_ncORF | Overlapping | 1 | 38915551 | 38919115 |
Intron | chr1:37931628 | frameshift_variant | 38 | G/X | ggG/gg | Consequential_in_ncORF_only | Not_overlapping | 1 | 37931430 | 37931741 |
Intron | chr1:37931660 | missense_variant | 28 | A/T | Gcg/Acg | Consequential_in_ncORF_only | Not_overlapping | 1 | 37931430 | 37931741 |
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