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Consequential variants from upstream, downstream and out-of-frame ORFs
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Canonical variant | Varaint | Noncanonical consequence | Protein position | Amino acids | Codons | Consequnce type | ncORF overlapping canonical | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|---|
Intron | chr1:11838868 | stop_gained | 7 | W/* | tgG/tgA | Consequential_in_ncORF_only | Not_overlapping | 1 | 11838848 | 11839018 |
Silent | chr1:11766530 | missense_variant | 58 | R/H | cGc/cAc | Consequential_in_ncORF_only | Overlapping | 1 | 11766358 | 11768123 |
Silent | chr1:11766494 | missense_variant | 46 | P/L | cCg/cTg | Consequential_in_ncORF_only | Overlapping | 1 | 11766358 | 11768123 |
Missense | chr1:11766424 | missense_variant | 23 | G/R | Ggg/Agg | Consequential_in_both_canonical_and_ncORF | Overlapping | 1 | 11766358 | 11768123 |
Missense | chr1:10957623 | missense_variant | 17 | G/R | Ggt/Cgt | Consequential_in_both_canonical_and_ncORF | Overlapping | 1 | 10955157 | 10957671 |
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